Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SIX6O95475 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SIX6O95475 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.87□□□□□ -0.03
SIX6O95475 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIX6O95475 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SIX6O95475 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.86□□□□□ -0.03
SIX6O95475 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SIX6O95475 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.86□□□□□ -0.03
SIX6O95475 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.86□□□□□ -0.03
SIX6O95475 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.86□□□□□ -0.03
SIX6O95475 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SIX6O95475 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SIX6O95475 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.86□□□□□ -0.03
SIX6O95475 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SIX6O95475 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.86□□□□□ -0.03
SIX6O95475 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIX6O95475 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 AC092368.3-202ENST00000574180 1591 ntBASIC14.85□□□□□ -0.03
SIX6O95475 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SIX6O95475 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 MIR564-202ENST00000385049 94 ntBASIC14.85□□□□□ -0.03
SIX6O95475 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SIX6O95475 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIX6O95475 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SIX6O95475 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.84□□□□□ -0.03
SIX6O95475 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SIX6O95475 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms