Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 HLA-J-201ENST00000462773 1622 ntBASIC17.97■□□□□ 0.47
PRAMEF11O60813 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF11O60813 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF11O60813 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 AC109462.3-201ENST00000573934 613 ntBASIC17.96■□□□□ 0.47
PRAMEF11O60813 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 AD001527.2-201ENST00000622994 785 ntBASIC17.96■□□□□ 0.47
PRAMEF11O60813 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF11O60813 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF11O60813 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 AC132008.2-207ENST00000454517 770 ntBASIC17.95■□□□□ 0.46
PRAMEF11O60813 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 KRT8P10-201ENST00000450021 1447 ntBASIC17.95■□□□□ 0.46
PRAMEF11O60813 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF11O60813 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF11O60813 AL353593.2-201ENST00000602529 1483 ntBASIC17.95■□□□□ 0.46
PRAMEF11O60813 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF11O60813 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF11O60813 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEF11O60813 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF11O60813 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF11O60813 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms