Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNND1O60716 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNND1O60716 HCG4B-203ENST00000450128 991 ntBASIC20.63■□□□□ 0.89
CTNND1O60716 YBX1P5-201ENST00000509441 847 ntBASIC20.63■□□□□ 0.89
CTNND1O60716 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNND1O60716 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNND1O60716 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNND1O60716 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNND1O60716 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNND1O60716 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 MIR4751-201ENST00000578027 74 ntBASIC20.62■□□□□ 0.89
CTNND1O60716 STK25P1-201ENST00000585406 838 ntBASIC20.62■□□□□ 0.89
CTNND1O60716 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.62■□□□□ 0.89
CTNND1O60716 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 AC092865.6-201ENST00000642101 219 ntBASIC20.62■□□□□ 0.89
CTNND1O60716 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNND1O60716 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNND1O60716 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNND1O60716 BX276092.7-203ENST00000637198 1536 ntBASIC20.62■□□□□ 0.89
CTNND1O60716 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNND1O60716 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTNND1O60716 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNND1O60716 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNND1O60716 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNND1O60716 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNND1O60716 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNND1O60716 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNND1O60716 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNND1O60716 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNND1O60716 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTNND1O60716 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNND1O60716 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNND1O60716 DDX43P3-201ENST00000441064 443 ntBASIC20.6■□□□□ 0.89
CTNND1O60716 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNND1O60716 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNND1O60716 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTNND1O60716 AC027796.2-201ENST00000575326 344 ntBASIC20.6■□□□□ 0.89
CTNND1O60716 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNND1O60716 AL355385.1-201ENST00000606123 409 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms