Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN4O14493 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN4O14493 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN4O14493 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN4O14493 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN4O14493 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN4O14493 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CLDN4O14493 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 BX276092.7-203ENST00000637198 1536 ntBASIC16.72■□□□□ 0.27
CLDN4O14493 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN4O14493 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN4O14493 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN4O14493 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
CLDN4O14493 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN4O14493 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN4O14493 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN4O14493 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 LINC01711-201ENST00000598340 967 ntBASIC16.72■□□□□ 0.27
CLDN4O14493 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 AL121772.3-201ENST00000610840 674 ntBASIC16.72■□□□□ 0.27
CLDN4O14493 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN4O14493 AC009949.1-201ENST00000623048 1830 ntBASIC16.72■□□□□ 0.27
CLDN4O14493 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN4O14493 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLDN4O14493 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN4O14493 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CLDN4O14493 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN4O14493 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CLDN4O14493 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN4O14493 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN4O14493 FAM220CP-201ENST00000395253 831 ntBASIC16.71■□□□□ 0.27
CLDN4O14493 KRT16P4-201ENST00000453883 522 ntBASIC16.71■□□□□ 0.27
CLDN4O14493 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN4O14493 AC096582.2-201ENST00000510860 516 ntBASIC16.71■□□□□ 0.27
CLDN4O14493 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN4O14493 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN4O14493 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN4O14493 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN4O14493 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 TP73-AS1-210ENST00000637775 1455 ntBASIC16.71■□□□□ 0.27
CLDN4O14493 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN4O14493 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN4O14493 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN4O14493 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
CLDN4O14493 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.7■□□□□ 0.26
CLDN4O14493 OR6D1P-203ENST00000641209 4860 ntBASIC16.7■□□□□ 0.26
CLDN4O14493 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN4O14493 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN4O14493 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN4O14493 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms