Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ASL-203ENST00000380839 1765 ntTSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 AL023806.1-201ENST00000603994 1649 ntBASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 AC007950.2-201ENST00000615045 2347 ntBASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 AC024909.3-201ENST00000611513 2257 ntBASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 POU5F1P4-201ENST00000413175 1085 ntBASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PTPA-214ENST00000423100 988 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms