Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IGHV3-41-201ENST00000613121 348 ntBASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM6-TRIM34B2RNG4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
TRIM6-TRIM34B2RNG4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
TRIM6-TRIM34B2RNG4 AC106820.2-201ENST00000563775 3264 ntBASIC21.7■■□□□ 1.07
TRIM6-TRIM34B2RNG4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 KRT18P35-201ENST00000510488 1269 ntBASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 KRT8P26-201ENST00000534154 1276 ntBASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 AL445228.2-201ENST00000605589 952 ntBASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 PCED1CP-201ENST00000419887 785 ntBASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 AL592071.1-201ENST00000611956 408 ntBASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM6-TRIM34B2RNG4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms