Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC090164.3-201ENST00000610780 2143 ntBASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 AC098818.2-201ENST00000564925 2320 ntBASIC26.18■■□□□ 1.78
SHANK2Q9UPX8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 AL078644.1-201ENST00000609881 752 ntBASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 AL596442.2-201ENST00000610240 980 ntBASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 GGTLC5P-201ENST00000617623 998 ntBASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 KRT19P2-202ENST00000557173 1012 ntBASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC26.17■■□□□ 1.78
SHANK2Q9UPX8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 ADH5P3-201ENST00000433842 1137 ntBASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC26.16■■□□□ 1.78
SHANK2Q9UPX8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 AC254562.1-201ENST00000417586 456 ntBASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 AC096734.2-201ENST00000562054 433 ntBASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SHANK2Q9UPX8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 ELL2P1-201ENST00000413990 1906 ntBASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 MIR4469-201ENST00000583919 79 ntBASIC26.14■■□□□ 1.78
SHANK2Q9UPX8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SHANK2Q9UPX8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
SHANK2Q9UPX8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
SHANK2Q9UPX8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 COX20P2-201ENST00000452636 358 ntBASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SHANK2Q9UPX8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms