Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 AL603756.1-201ENST00000606511 2163 ntBASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 AC091390.4-202ENST00000476426 537 ntBASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COMMD3Q9UBI1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 AC068418.2-201ENST00000577309 3703 ntBASIC15.64■□□□□ 0.09
COMMD3Q9UBI1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COMMD3Q9UBI1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms