Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.58■□□□□ 0.89
VAT1LQ9HCJ6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.58■□□□□ 0.88
VAT1LQ9HCJ6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 FAAHP1-202ENST00000446499 1238 ntBASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 AL390961.4-201ENST00000623958 2535 ntBASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VAT1LQ9HCJ6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC018470.1-201ENST00000624790 3129 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 FAM220CP-201ENST00000395253 831 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SAPCD2P3-201ENST00000455031 850 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC104692.2-201ENST00000603054 253 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AP001269.4-201ENST00000609611 512 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.56■□□□□ 0.88
VAT1LQ9HCJ6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms