Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 AC067930.6-201ENST00000623257 4947 ntBASIC16.94■□□□□ 0.3
VCX3BQ9H321 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.94■□□□□ 0.3
VCX3BQ9H321 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCX3BQ9H321 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 POU5F1P3-201ENST00000428824 1078 ntBASIC16.93■□□□□ 0.3
VCX3BQ9H321 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 HLA-A-209ENST00000638375 975 ntBASIC16.93■□□□□ 0.3
VCX3BQ9H321 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VCX3BQ9H321 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3BQ9H321 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 PRSS44-201ENST00000515154 1146 ntBASIC16.92■□□□□ 0.3
VCX3BQ9H321 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3BQ9H321 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VCX3BQ9H321 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms