Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDC1Q9BTX1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 AC011467.2-201ENST00000598425 242 ntBASIC16.96■□□□□ 0.31
NDC1Q9BTX1 AL121912.1-201ENST00000603683 238 ntBASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.96■□□□□ 0.31
NDC1Q9BTX1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.96■□□□□ 0.3
NDC1Q9BTX1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.96■□□□□ 0.3
NDC1Q9BTX1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 PKD1P1-201ENST00000458669 6805 ntBASIC16.95■□□□□ 0.3
NDC1Q9BTX1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 AC132008.2-207ENST00000454517 770 ntBASIC16.95■□□□□ 0.3
NDC1Q9BTX1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 AL031008.1-201ENST00000619963 541 ntBASIC16.95■□□□□ 0.3
NDC1Q9BTX1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 KRT8P10-201ENST00000450021 1447 ntBASIC16.95■□□□□ 0.3
NDC1Q9BTX1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDC1Q9BTX1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 AKR1C7P-201ENST00000305623 895 ntBASIC16.94■□□□□ 0.3
NDC1Q9BTX1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 AL160237.2-201ENST00000556165 472 ntBASIC16.94■□□□□ 0.3
NDC1Q9BTX1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms