Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 RARRES2P8-201ENST00000566335 367 ntBASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 GNAS-203ENST00000306120 1878 ntBASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN3Q9BTN0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 LINC01225-203ENST00000563550 1244 ntBASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 AC099568.2-201ENST00000609194 695 ntBASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 AC073592.8-201ENST00000624126 511 ntBASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN3Q9BTN0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 AC011495.1-201ENST00000498085 584 ntBASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 RN7SL190P-201ENST00000582519 257 ntBASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN3Q9BTN0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 AC119751.2-201ENST00000504529 210 ntBASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms