Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 AL109659.2-201ENST00000606809 1674 ntBASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 AL121829.2-201ENST00000620908 328 ntBASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IPQ96QF0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IPQ96QF0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 AL137784.2-201ENST00000607332 1000 ntBASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IPQ96QF0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 AC068587.6-202ENST00000641839 5619 ntBASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 AC093787.1-201ENST00000450396 207 ntBASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 LINC01451-201ENST00000623792 534 ntBASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms