Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE4Q96A23 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE4Q96A23 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.96■□□□□ 0.14
CPNE4Q96A23 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.96■□□□□ 0.14
CPNE4Q96A23 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 AC138894.3-201ENST00000603787 634 ntBASIC15.95■□□□□ 0.14
CPNE4Q96A23 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 AL390961.4-201ENST00000623958 2535 ntBASIC15.95■□□□□ 0.14
CPNE4Q96A23 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE4Q96A23 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE4Q96A23 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 FOSL1P1-201ENST00000511041 816 ntBASIC15.94■□□□□ 0.14
CPNE4Q96A23 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 BNIP3P18-201ENST00000593976 575 ntBASIC15.94■□□□□ 0.14
CPNE4Q96A23 LINC01711-201ENST00000598340 967 ntBASIC15.94■□□□□ 0.14
CPNE4Q96A23 AC114341.1-201ENST00000618070 349 ntBASIC15.94■□□□□ 0.14
CPNE4Q96A23 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CPNE4Q96A23 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE4Q96A23 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 TP73-AS1-210ENST00000637775 1455 ntBASIC15.93■□□□□ 0.14
CPNE4Q96A23 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 NUS1P2-201ENST00000417358 873 ntBASIC15.93■□□□□ 0.14
CPNE4Q96A23 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 DDX43P3-201ENST00000441064 443 ntBASIC15.93■□□□□ 0.14
CPNE4Q96A23 KRT16P4-201ENST00000453883 522 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms