Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 AC109462.3-201ENST00000573934 613 ntBASIC21.43■■□□□ 1.02
SNED1Q8TER0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 BX323043.1-201ENST00000641006 1765 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 AC023141.5-201ENST00000458585 616 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 AC093520.2-201ENST00000561830 333 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 AC015911.4-201ENST00000588022 1070 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 GGTLC5P-201ENST00000617623 998 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 AC092919.2-201ENST00000623631 1645 ntBASIC21.42■■□□□ 1.02
SNED1Q8TER0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SNED1Q8TER0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNED1Q8TER0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 AL121761.2-201ENST00000598007 1648 ntBASIC21.41■■□□□ 1.02
SNED1Q8TER0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 AC004835.2-201ENST00000603762 682 ntBASIC21.41■■□□□ 1.02
SNED1Q8TER0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 AC093503.3-201ENST00000624917 2352 ntBASIC21.41■■□□□ 1.02
SNED1Q8TER0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 TNXA-203ENST00000507684 2038 ntBASIC21.41■■□□□ 1.02
SNED1Q8TER0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNED1Q8TER0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SNED1Q8TER0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 LINC00982-205ENST00000420957 435 ntBASIC21.4■■□□□ 1.02
SNED1Q8TER0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 AC023141.13-201ENST00000604991 943 ntBASIC21.4■■□□□ 1.02
SNED1Q8TER0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 AC100803.2-201ENST00000562459 1963 ntBASIC21.4■■□□□ 1.02
SNED1Q8TER0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.4■■□□□ 1.02
SNED1Q8TER0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNED1Q8TER0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SNED1Q8TER0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.39■■□□□ 1.02
SNED1Q8TER0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms