Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 DRAXINP1-201ENST00000437611 948 ntBASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCLL1Q8TB92 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 NKILA-202ENST00000614771 2598 ntBASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 UPK3BP1-201ENST00000428678 509 ntBASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 AP002383.4-201ENST00000442518 975 ntBASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 MTCL1P1-201ENST00000446207 792 ntBASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 IGHV3-41-201ENST00000613121 348 ntBASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLL1Q8TB92 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCLL1Q8TB92 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 AC011676.5-201ENST00000624864 2660 ntBASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 AC246785.2-201ENST00000432512 513 ntBASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGCLL1Q8TB92 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms