Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 AC244517.3-201ENST00000616254 1235 ntBASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC116Q8IYX3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 IGHV3-41-201ENST00000613121 348 ntBASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 AC124864.1-201ENST00000623408 392 ntBASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCDC116Q8IYX3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 KRT8P26-201ENST00000534154 1276 ntBASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC116Q8IYX3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms