Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RNASET2-201ENST00000028008 1220 ntTSL 517.18■□□□□ 0.343e-10■□□□□ 10.3
LARP4Q71RC2 RNASET2-207ENST00000478180 963 ntTSL 516.6■□□□□ 0.253e-10■□□□□ 10.3
LARP4Q71RC2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.133e-10■□□□□ 10.3
LARP4Q71RC2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.953e-10■□□□□ 10.3
LARP4Q71RC2 SLIRP-203ENST00000554074 445 ntTSL 36□□□□□ -1.455e-8■□□□□ 10.3
LARP4Q71RC2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.141e-7■□□□□ 10.3
LARP4Q71RC2 MRPL10-204ENST00000421763 1576 ntTSL 219.8■□□□□ 0.761e-7■□□□□ 10.3
LARP4Q71RC2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.7■□□□□ 0.421e-7■□□□□ 10.3
LARP4Q71RC2 MRPL10-201ENST00000290208 2013 ntTSL 2 BASIC10.46□□□□□ -0.731e-7■□□□□ 10.3
LARP4Q71RC2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.62□□□□□ -0.232e-10■□□□□ 10.3
LARP4Q71RC2 BPTF-208ENST00000544778 7573 ntTSL 519.06■□□□□ 0.649e-9■□□□□ 10.3
LARP4Q71RC2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.559e-9■□□□□ 10.3
LARP4Q71RC2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.139e-9■□□□□ 10.3
LARP4Q71RC2 BPTF-205ENST00000424123 8295 ntAPPRIS ALT2 TSL 1 (best)5.12□□□□□ -1.599e-9■□□□□ 10.3
LARP4Q71RC2 B2M-213ENST00000623550 2329 nt6.95□□□□□ -1.31e-9■□□□□ 10.3
LARP4Q71RC2 RPL13A-208ENST00000477613 796 ntTSL 516.02■□□□□ 0.162e-12■□□□□ 10.3
LARP4Q71RC2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.322e-7■□□□□ 10.3
LARP4Q71RC2 SNU13-208ENST00000488571 556 ntTSL 510.22□□□□□ -0.771e-9■□□□□ 10.3
LARP4Q71RC2 SNU13-206ENST00000469028 736 ntTSL 510.15□□□□□ -0.781e-9■□□□□ 10.3
LARP4Q71RC2 ATP5O-210ENST00000496044 673 ntTSL 215.78■□□□□ 0.124e-9■□□□□ 10.3
LARP4Q71RC2 ATP5O-207ENST00000487374 469 ntTSL 514.69□□□□□ -0.064e-9■□□□□ 10.3
LARP4Q71RC2 ATP5O-206ENST00000484627 157 ntTSL 1 (best)6.65□□□□□ -1.344e-9■□□□□ 10.3
LARP4Q71RC2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-28■□□□□ 10.3
LARP4Q71RC2 PTK7-207ENST00000461389 1035 ntTSL 213.32□□□□□ -0.282e-6■□□□□ 10.3
LARP4Q71RC2 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.672e-6■□□□□ 10.3
LARP4Q71RC2 RPLP0-222ENST00000551336 406 ntTSL 318.01■□□□□ 0.473e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-227ENST00000552902 869 ntTSL 217.71■□□□□ 0.433e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-223ENST00000551783 676 ntTSL 217.58■□□□□ 0.43e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-218ENST00000550856 1003 ntTSL 216.23■□□□□ 0.193e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-215ENST00000549242 518 ntTSL 211.78□□□□□ -0.523e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-208ENST00000547191 680 ntTSL 59.85□□□□□ -0.833e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-221ENST00000551258 966 ntTSL 59.53□□□□□ -0.883e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-212ENST00000548551 543 ntTSL 29.18□□□□□ -0.943e-9■□□□□ 10.3
LARP4Q71RC2 RPLP0-211ENST00000548495 651 ntTSL 39.13□□□□□ -0.953e-9■□□□□ 10.3
LARP4Q71RC2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.811e-6■□□□□ 10.3
LARP4Q71RC2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.83■□□□□ 0.761e-6■□□□□ 10.3
LARP4Q71RC2 ZNF511-203ENST00000463816 605 ntTSL 516.28■□□□□ 0.21e-6■□□□□ 10.3
LARP4Q71RC2 HGS-203ENST00000570652 523 ntTSL 519.06■□□□□ 0.648e-9■□□□□ 10.3
LARP4Q71RC2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.328e-9■□□□□ 10.3
LARP4Q71RC2 HGS-210ENST00000573320 547 ntTSL 313.94□□□□□ -0.188e-9■□□□□ 10.3
LARP4Q71RC2 HGS-211ENST00000573949 461 ntTSL 512.48□□□□□ -0.418e-9■□□□□ 10.3
LARP4Q71RC2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.982e-6■□□□□ 10.3
LARP4Q71RC2 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.67□□□□□ -0.384e-8■□□□□ 10.3
LARP4Q71RC2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.61□□□□□ -0.394e-8■□□□□ 10.3
LARP4Q71RC2 GRIPAP1-212ENST00000619149 2828 ntTSL 211.97□□□□□ -0.494e-8■□□□□ 10.3
LARP4Q71RC2 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.524e-8■□□□□ 10.3
LARP4Q71RC2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.16e-15■□□□□ 10.3
LARP4Q71RC2 MVD-209ENST00000565149 2352 ntTSL 1 (best)19.28■□□□□ 0.686e-15■□□□□ 10.3
LARP4Q71RC2 RPL13-205ENST00000467736 528 ntTSL 315.3■□□□□ 0.047e-28■□□□□ 10.2
LARP4Q71RC2 NHP2-205ENST00000511078 475 ntTSL 215.16■□□□□ 0.021e-6■□□□□ 10.2
LARP4Q71RC2 NHP2-206ENST00000514354 472 ntTSL 313.16□□□□□ -0.31e-6■□□□□ 10.2
LARP4Q71RC2 NHP2-203ENST00000502263 552 ntTSL 28.53□□□□□ -1.041e-6■□□□□ 10.2
LARP4Q71RC2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.791e-25■□□□□ 10.2
LARP4Q71RC2 P4HB-202ENST00000415593 1669 ntTSL 1 (best)16.92■□□□□ 0.31e-25■□□□□ 10.2
LARP4Q71RC2 P4HB-220ENST00000575069 2453 ntTSL 214.69□□□□□ -0.061e-25■□□□□ 10.2
LARP4Q71RC2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.371e-16■□□□□ 10.2
LARP4Q71RC2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.78e-9■□□□□ 10.2
LARP4Q71RC2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.09■□□□□ 0.498e-9■□□□□ 10.2
LARP4Q71RC2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.11■□□□□ 0.178e-9■□□□□ 10.2
LARP4Q71RC2 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.786e-7■□□□□ 10.2
LARP4Q71RC2 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.96e-7■□□□□ 10.2
LARP4Q71RC2 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -16e-7■□□□□ 10.2
LARP4Q71RC2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.71□□□□□ -1.186e-7■□□□□ 10.2
LARP4Q71RC2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.186e-7■□□□□ 10.2
LARP4Q71RC2 P3H1-211ENST00000472802 646 ntTSL 212.7□□□□□ -0.382e-10■□□□□ 10.2
LARP4Q71RC2 P3H1-209ENST00000462474 581 ntTSL 212.15□□□□□ -0.462e-10■□□□□ 10.2
LARP4Q71RC2 ESPN-207ENST00000475228 813 ntTSL 515.64■□□□□ 0.092e-7■□□□□ 10.2
LARP4Q71RC2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.942e-16■□□□□ 10.2
LARP4Q71RC2 EML2-205ENST00000586195 1952 ntTSL 220.74■□□□□ 0.912e-16■□□□□ 10.2
LARP4Q71RC2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.752e-16■□□□□ 10.2
LARP4Q71RC2 EML2-215ENST00000588308 2062 ntTSL 218.63■□□□□ 0.572e-16■□□□□ 10.2
LARP4Q71RC2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.352e-16■□□□□ 10.2
LARP4Q71RC2 RPL13-209ENST00000491523 698 ntTSL 320.93■□□□□ 0.942e-87■□□□□ 10.2
LARP4Q71RC2 RPL13-208ENST00000487034 615 ntTSL 1 (best)20.63■□□□□ 0.892e-87■□□□□ 10.2
LARP4Q71RC2 RPL13-213ENST00000565571 568 ntTSL 212.95□□□□□ -0.342e-87■□□□□ 10.2
LARP4Q71RC2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.384e-37■□□□□ 10.2
LARP4Q71RC2 FKBP1A-208ENST00000474726 551 ntTSL 35.4□□□□□ -1.545e-7■□□□□ 10.2
LARP4Q71RC2 SLC16A3-205ENST00000578574 958 ntTSL 221.71■■□□□ 1.074e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-220ENST00000584781 562 ntTSL 420.58■□□□□ 0.894e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-208ENST00000579572 863 ntTSL 318.24■□□□□ 0.514e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-206ENST00000578684 866 ntTSL 317.42■□□□□ 0.384e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-217ENST00000583237 808 ntTSL 316.7■□□□□ 0.264e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-212ENST00000581642 557 ntTSL 416.54■□□□□ 0.244e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-219ENST00000584689 1033 ntTSL 216.53■□□□□ 0.244e-10■□□□□ 10.2
LARP4Q71RC2 SLC16A3-203ENST00000577650 545 ntTSL 315.19■□□□□ 0.024e-10■□□□□ 10.2
LARP4Q71RC2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.592e-6■□□□□ 10.2
LARP4Q71RC2 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.547e-10■□□□□ 10.2
LARP4Q71RC2 B2M-207ENST00000559907 499 ntTSL 313.11□□□□□ -0.311e-9■□□□□ 10.2
LARP4Q71RC2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.131e-13■□□□□ 10.2
LARP4Q71RC2 CYP2W1-203ENST00000415893 890 ntTSL 316.55■□□□□ 0.242e-7■□□□□ 10.2
LARP4Q71RC2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.84■■■□□ 2.692e-8■□□□□ 10.2
LARP4Q71RC2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.61e-6■□□□□ 10.2
LARP4Q71RC2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.51e-6■□□□□ 10.2
LARP4Q71RC2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.24■■□□□ 1.471e-6■□□□□ 10.2
LARP4Q71RC2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.281e-6■□□□□ 10.2
LARP4Q71RC2 TSEN34-207ENST00000496583 2372 ntTSL 222.4■■□□□ 1.181e-6■□□□□ 10.2
LARP4Q71RC2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.122e-8■□□□□ 10.2
LARP4Q71RC2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.111e-6■□□□□ 10.2
LARP4Q71RC2 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.17■□□□□ 0.982e-8■□□□□ 10.2
LARP4Q71RC2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.983e-9■□□□□ 10.2
Retrieved 100 of 15,922 protein–RNA pairs in 193.3 ms