Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 MIR662-201ENST00000384847 95 ntBASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 TSPY12P-201ENST00000421279 868 ntBASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 TSPY5P-201ENST00000426936 936 ntBASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 AC112698.1-201ENST00000510299 916 ntBASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WDR88Q6ZMY6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 RNF152P1-201ENST00000397754 604 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 FAM8A6P-201ENST00000407496 1135 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 AP003733.1-201ENST00000491725 852 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 AC009053.2-201ENST00000563701 2365 ntBASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WDR88Q6ZMY6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AL353692.3-201ENST00000407031 1396 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 SPDYE13P-201ENST00000445314 798 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AC112907.2-201ENST00000448639 330 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 LINC01451-201ENST00000623792 534 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AC022211.2-201ENST00000585075 2527 ntBASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms