Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SYPL1Q16563 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SYPL1Q16563 HOMER2P1-201ENST00000455653 964 ntBASIC16.54■□□□□ 0.24
SYPL1Q16563 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.54■□□□□ 0.24
SYPL1Q16563 VENTXP5-201ENST00000523979 775 ntBASIC16.54■□□□□ 0.24
SYPL1Q16563 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.54■□□□□ 0.24
SYPL1Q16563 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.54■□□□□ 0.24
SYPL1Q16563 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.54■□□□□ 0.24
SYPL1Q16563 LINC01451-201ENST00000623792 534 ntBASIC16.54■□□□□ 0.24
SYPL1Q16563 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SYPL1Q16563 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SYPL1Q16563 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
SYPL1Q16563 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
SYPL1Q16563 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SYPL1Q16563 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SYPL1Q16563 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYPL1Q16563 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SYPL1Q16563 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SYPL1Q16563 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SYPL1Q16563 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.53■□□□□ 0.24
SYPL1Q16563 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.53■□□□□ 0.24
SYPL1Q16563 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.53■□□□□ 0.24
SYPL1Q16563 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.53■□□□□ 0.24
SYPL1Q16563 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
SYPL1Q16563 GPR32P1-201ENST00000601788 811 ntBASIC16.53■□□□□ 0.24
SYPL1Q16563 LINC01023-201ENST00000606054 436 ntBASIC16.53■□□□□ 0.24
SYPL1Q16563 HYMAI.1-201ENST00000620949 238 ntBASIC16.53■□□□□ 0.24
SYPL1Q16563 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.53■□□□□ 0.24
SYPL1Q16563 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SYPL1Q16563 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.53■□□□□ 0.24
SYPL1Q16563 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYPL1Q16563 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.52■□□□□ 0.24
SYPL1Q16563 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 AC104076.2-201ENST00000448912 469 ntBASIC16.52■□□□□ 0.24
SYPL1Q16563 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.52■□□□□ 0.24
SYPL1Q16563 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SYPL1Q16563 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.52■□□□□ 0.24
SYPL1Q16563 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYPL1Q16563 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYPL1Q16563 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYPL1Q16563 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYPL1Q16563 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SYPL1Q16563 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SYPL1Q16563 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SYPL1Q16563 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms