Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 PCDHA12-202ENST00000613593 2588 ntBASIC17.13■□□□□ 0.33
HMGCS1Q01581 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 KRT18P38-201ENST00000449496 1282 ntBASIC17.13■□□□□ 0.33
HMGCS1Q01581 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 HLA-J-201ENST00000462773 1622 ntBASIC17.13■□□□□ 0.33
HMGCS1Q01581 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 AL138688.1-201ENST00000624851 1594 ntBASIC17.12■□□□□ 0.33
HMGCS1Q01581 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 FAM8A6P-201ENST00000407496 1135 ntBASIC17.12■□□□□ 0.33
HMGCS1Q01581 TSPY12P-201ENST00000421279 868 ntBASIC17.12■□□□□ 0.33
HMGCS1Q01581 FAM210CP-201ENST00000445714 574 ntBASIC17.12■□□□□ 0.33
HMGCS1Q01581 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 KRT18P21-201ENST00000515767 1272 ntBASIC17.12■□□□□ 0.33
HMGCS1Q01581 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCS1Q01581 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HMGCS1Q01581 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 AL359075.1-203ENST00000462729 1002 ntBASIC17.11■□□□□ 0.33
HMGCS1Q01581 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 RN7SL850P-201ENST00000579959 291 ntBASIC17.11■□□□□ 0.33
HMGCS1Q01581 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 AC009154.2-201ENST00000621177 724 ntBASIC17.11■□□□□ 0.33
HMGCS1Q01581 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCS1Q01581 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCS1Q01581 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms