Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SOX6P35712 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.96■□□□□ 0.15
SOX6P35712 AC083880.1-201ENST00000608266 535 ntBASIC15.96■□□□□ 0.15
SOX6P35712 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX6P35712 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX6P35712 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
SOX6P35712 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SOX6P35712 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SOX6P35712 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX6P35712 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX6P35712 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SOX6P35712 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX6P35712 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SOX6P35712 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SOX6P35712 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SOX6P35712 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 POU5F1P3-201ENST00000428824 1078 ntBASIC15.95■□□□□ 0.14
SOX6P35712 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX6P35712 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX6P35712 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX6P35712 AL121829.2-201ENST00000620908 328 ntBASIC15.95■□□□□ 0.14
SOX6P35712 HLA-B-256ENST00000639848 1089 ntBASIC15.95■□□□□ 0.14
SOX6P35712 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.95■□□□□ 0.14
SOX6P35712 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
SOX6P35712 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX6P35712 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX6P35712 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX6P35712 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 PRSS44-201ENST00000515154 1146 ntBASIC15.94■□□□□ 0.14
SOX6P35712 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 AC092368.3-202ENST00000574180 1591 ntBASIC15.94■□□□□ 0.14
SOX6P35712 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX6P35712 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
SOX6P35712 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
SOX6P35712 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX6P35712 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SOX6P35712 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SOX6P35712 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX6P35712 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX6P35712 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms