Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.65■□□□□ 0.58
PDGFRAP16234 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.65■□□□□ 0.58
PDGFRAP16234 DDX43P3-201ENST00000441064 443 ntBASIC18.65■□□□□ 0.58
PDGFRAP16234 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDGFRAP16234 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 KRT18P1-202ENST00000452408 1331 ntBASIC18.65■□□□□ 0.58
PDGFRAP16234 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
PDGFRAP16234 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDGFRAP16234 FZD10-202ENST00000539839 3282 ntBASIC18.65■□□□□ 0.58
PDGFRAP16234 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFRAP16234 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 AL355312.1-201ENST00000407115 2176 ntBASIC18.65■□□□□ 0.58
PDGFRAP16234 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFRAP16234 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFRAP16234 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFRAP16234 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFRAP16234 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFRAP16234 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PDGFRAP16234 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFRAP16234 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PDGFRAP16234 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PDGFRAP16234 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDGFRAP16234 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.64■□□□□ 0.57
PDGFRAP16234 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.64■□□□□ 0.57
PDGFRAP16234 MIR3180-1-201ENST00000580374 94 ntBASIC18.64■□□□□ 0.57
PDGFRAP16234 MIR3180-3-201ENST00000584616 94 ntBASIC18.64■□□□□ 0.57
PDGFRAP16234 AC092329.2-201ENST00000598402 547 ntBASIC18.64■□□□□ 0.57
PDGFRAP16234 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.64■□□□□ 0.57
PDGFRAP16234 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFRAP16234 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.64■□□□□ 0.57
PDGFRAP16234 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFRAP16234 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFRAP16234 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFRAP16234 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDGFRAP16234 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFRAP16234 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 AC011840.4-201ENST00000578471 627 ntBASIC18.63■□□□□ 0.57
PDGFRAP16234 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFRAP16234 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFRAP16234 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFRAP16234 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.62■□□□□ 0.57
PDGFRAP16234 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 AL845331.1-201ENST00000424978 1190 ntBASIC18.62■□□□□ 0.57
PDGFRAP16234 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PDGFRAP16234 AL353801.3-201ENST00000609898 542 ntBASIC18.62■□□□□ 0.57
PDGFRAP16234 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDGFRAP16234 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.62■□□□□ 0.57
PDGFRAP16234 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDGFRAP16234 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.62■□□□□ 0.57
PDGFRAP16234 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFRAP16234 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms