Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 REXO1L6P-202ENST00000619970 1078 ntBASIC20.86■□□□□ 0.93
TOP1P11387 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP1P11387 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TOP1P11387 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP1P11387 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.85■□□□□ 0.93
TOP1P11387 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 AC007967.3-201ENST00000434308 558 ntBASIC20.85■□□□□ 0.93
TOP1P11387 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.85■□□□□ 0.93
TOP1P11387 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP1P11387 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP1P11387 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP1P11387 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TOP1P11387 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP1P11387 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP1P11387 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP1P11387 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 AP000997.3-201ENST00000623333 2250 ntBASIC20.84■□□□□ 0.93
TOP1P11387 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.84■□□□□ 0.93
TOP1P11387 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TOP1P11387 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TOP1P11387 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 AC132008.2-207ENST00000454517 770 ntBASIC20.84■□□□□ 0.93
TOP1P11387 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TOP1P11387 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.84■□□□□ 0.93
TOP1P11387 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.84■□□□□ 0.93
TOP1P11387 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.84■□□□□ 0.93
TOP1P11387 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.84■□□□□ 0.93
TOP1P11387 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.84■□□□□ 0.93
TOP1P11387 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP1P11387 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TOP1P11387 FLJ13224-201ENST00000313737 1514 ntBASIC20.83■□□□□ 0.93
TOP1P11387 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TOP1P11387 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TOP1P11387 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.83■□□□□ 0.93
TOP1P11387 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
TOP1P11387 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms