Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 PCDHA14-201ENST00000506751 2298 ntBASIC19.95■□□□□ 0.78
TPM3P06753 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.95■□□□□ 0.78
TPM3P06753 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.95■□□□□ 0.78
TPM3P06753 C1QBPP2-201ENST00000528754 825 ntBASIC19.95■□□□□ 0.78
TPM3P06753 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM3P06753 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
TPM3P06753 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TPM3P06753 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM3P06753 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 MESTP1-201ENST00000404287 994 ntBASIC19.94■□□□□ 0.78
TPM3P06753 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 KRT18P23-201ENST00000435622 1283 ntBASIC19.94■□□□□ 0.78
TPM3P06753 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.94■□□□□ 0.78
TPM3P06753 AC006058.3-201ENST00000606217 1069 ntBASIC19.94■□□□□ 0.78
TPM3P06753 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM3P06753 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TPM3P06753 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TPM3P06753 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM3P06753 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM3P06753 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TPM3P06753 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TPM3P06753 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
TPM3P06753 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM3P06753 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
TPM3P06753 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TPM3P06753 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.93■□□□□ 0.78
TPM3P06753 HLA-L-209ENST00000420110 1011 ntBASIC19.93■□□□□ 0.78
TPM3P06753 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.93■□□□□ 0.78
TPM3P06753 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM3P06753 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.93■□□□□ 0.78
TPM3P06753 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM3P06753 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM3P06753 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TPM3P06753 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.92■□□□□ 0.78
TPM3P06753 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPM3P06753 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms