Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.29□□□□□ -0.12
APOC3P02656 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC3P02656 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 SLC7A5P2-201ENST00000553010 536 ntBASIC14.29□□□□□ -0.12
APOC3P02656 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC3P02656 AC105233.4-201ENST00000642045 216 ntBASIC14.29□□□□□ -0.12
APOC3P02656 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 SNX18-202ENST00000343017 3140 ntBASIC14.29□□□□□ -0.12
APOC3P02656 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 PHGDH-209ENST00000641074 1780 ntBASIC14.29□□□□□ -0.12
APOC3P02656 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 AC124283.5-201ENST00000624661 1809 ntBASIC14.29□□□□□ -0.12
APOC3P02656 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOC3P02656 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 CYP21A1P-202ENST00000354927 1481 ntBASIC14.28□□□□□ -0.12
APOC3P02656 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.28□□□□□ -0.12
APOC3P02656 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOC3P02656 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC3P02656 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 KRT125P-201ENST00000546827 989 ntBASIC14.28□□□□□ -0.12
APOC3P02656 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC3P02656 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC3P02656 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOC3P02656 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC3P02656 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
APOC3P02656 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC3P02656 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC3P02656 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC3P02656 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms