Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 IGHV3-41-201ENST00000613121 348 ntBASIC17.08■□□□□ 0.32
PRAMEF4O60810 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 CROCCP2-202ENST00000412962 2773 ntBASIC17.07■□□□□ 0.32
PRAMEF4O60810 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 AC090616.6-201ENST00000582640 721 ntBASIC17.07■□□□□ 0.32
PRAMEF4O60810 AL445228.2-201ENST00000605589 952 ntBASIC17.07■□□□□ 0.32
PRAMEF4O60810 AL138831.2-201ENST00000606564 490 ntBASIC17.07■□□□□ 0.32
PRAMEF4O60810 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF4O60810 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF4O60810 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
PRAMEF4O60810 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 CHCHD2P8-201ENST00000429873 447 ntBASIC17.06■□□□□ 0.32
PRAMEF4O60810 AC007967.3-201ENST00000434308 558 ntBASIC17.06■□□□□ 0.32
PRAMEF4O60810 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF4O60810 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF4O60810 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 AC106820.2-201ENST00000563775 3264 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 COX5BP2-201ENST00000392354 334 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 BX276092.5-203ENST00000456199 560 ntBASIC17.05■□□□□ 0.32
PRAMEF4O60810 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF4O60810 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF4O60810 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms