Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.61■□□□□ 0.41
NOBOXO60393 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.61■□□□□ 0.41
NOBOXO60393 AC106795.1-205ENST00000512851 1056 ntBASIC17.61■□□□□ 0.41
NOBOXO60393 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.61■□□□□ 0.41
NOBOXO60393 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.61■□□□□ 0.41
NOBOXO60393 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.61■□□□□ 0.41
NOBOXO60393 SLC25A6P4-201ENST00000586535 553 ntBASIC17.61■□□□□ 0.41
NOBOXO60393 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.61■□□□□ 0.41
NOBOXO60393 AC009154.2-201ENST00000621177 724 ntBASIC17.61■□□□□ 0.41
NOBOXO60393 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.61■□□□□ 0.41
NOBOXO60393 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOBOXO60393 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NOBOXO60393 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NOBOXO60393 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.6■□□□□ 0.41
NOBOXO60393 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 AC096582.2-201ENST00000510860 516 ntBASIC17.6■□□□□ 0.41
NOBOXO60393 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NOBOXO60393 AF238378.1-201ENST00000526806 358 ntBASIC17.6■□□□□ 0.41
NOBOXO60393 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NOBOXO60393 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.6■□□□□ 0.41
NOBOXO60393 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 MIR5100-201ENST00000579544 119 ntBASIC17.6■□□□□ 0.41
NOBOXO60393 AC114341.1-201ENST00000618070 349 ntBASIC17.6■□□□□ 0.41
NOBOXO60393 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NOBOXO60393 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOBOXO60393 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NOBOXO60393 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 MTCL1P1-201ENST00000446207 792 ntBASIC17.59■□□□□ 0.41
NOBOXO60393 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 AL591684.3-201ENST00000605187 298 ntBASIC17.59■□□□□ 0.41
NOBOXO60393 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.59■□□□□ 0.41
NOBOXO60393 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOBOXO60393 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
NOBOXO60393 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOBOXO60393 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOBOXO60393 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOBOXO60393 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NOBOXO60393 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOBOXO60393 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.58■□□□□ 0.41
NOBOXO60393 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.58■□□□□ 0.41
NOBOXO60393 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NOBOXO60393 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
NOBOXO60393 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.58■□□□□ 0.4
NOBOXO60393 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms