Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COLCA2A8K830 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 DUX4L19-201ENST00000557448 1267 ntBASIC13.63□□□□□ -0.23
COLCA2A8K830 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.63□□□□□ -0.23
COLCA2A8K830 SLC7A5P1-201ENST00000568957 537 ntBASIC13.63□□□□□ -0.23
COLCA2A8K830 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.63□□□□□ -0.23
COLCA2A8K830 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 AC016396.2-201ENST00000562575 1417 ntBASIC13.63□□□□□ -0.23
COLCA2A8K830 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.62□□□□□ -0.23
COLCA2A8K830 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
COLCA2A8K830 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 AC046185.3-201ENST00000623228 1824 ntBASIC13.62□□□□□ -0.23
COLCA2A8K830 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.62□□□□□ -0.23
COLCA2A8K830 KRT18P41-201ENST00000518924 1277 ntBASIC13.62□□□□□ -0.23
COLCA2A8K830 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
COLCA2A8K830 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.62□□□□□ -0.23
COLCA2A8K830 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
COLCA2A8K830 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.62□□□□□ -0.23
COLCA2A8K830 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.62□□□□□ -0.23
COLCA2A8K830 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COLCA2A8K830 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.61□□□□□ -0.23
COLCA2A8K830 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
COLCA2A8K830 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
COLCA2A8K830 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.61□□□□□ -0.23
COLCA2A8K830 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 KRT18P20-201ENST00000548986 1279 ntBASIC13.61□□□□□ -0.23
COLCA2A8K830 AC126544.1-201ENST00000580842 1059 ntBASIC13.61□□□□□ -0.23
COLCA2A8K830 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms