Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC26.14■■□□□ 1.77
HFM1A2PYH4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC26.14■■□□□ 1.77
HFM1A2PYH4 TK1-204ENST00000590430 683 ntTSL 3 BASIC26.14■■□□□ 1.77
HFM1A2PYH4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC26.14■■□□□ 1.77
HFM1A2PYH4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 AC145285.3-201ENST00000564603 959 ntBASIC26.13■■□□□ 1.77
HFM1A2PYH4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
HFM1A2PYH4 AC117500.6-201ENST00000624871 588 ntBASIC26.13■■□□□ 1.77
HFM1A2PYH4 AP002414.3-201ENST00000589352 1468 ntBASIC26.13■■□□□ 1.77
HFM1A2PYH4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HFM1A2PYH4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 AC098831.1-202ENST00000438821 336 ntBASIC26.12■■□□□ 1.77
HFM1A2PYH4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 NME4-212ENST00000621774 904 ntTSL 3 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 AC116407.3-201ENST00000623905 1129 ntBASIC26.12■■□□□ 1.77
HFM1A2PYH4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HFM1A2PYH4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC26.12■■□□□ 1.77
HFM1A2PYH4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AC133963.1-201ENST00000504166 1679 ntBASIC26.11■■□□□ 1.77
HFM1A2PYH4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AL590627.1-203ENST00000421194 1026 ntBASIC26.11■■□□□ 1.77
HFM1A2PYH4 AC079776.4-201ENST00000511039 504 ntBASIC26.11■■□□□ 1.77
HFM1A2PYH4 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AL139327.4-201ENST00000612362 153 ntBASIC26.11■■□□□ 1.77
HFM1A2PYH4 AC004706.3-202ENST00000621574 984 ntBASIC26.11■■□□□ 1.77
HFM1A2PYH4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
HFM1A2PYH4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC26.11■■□□□ 1.77
HFM1A2PYH4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 AL355312.1-201ENST00000407115 2176 ntBASIC26.1■■□□□ 1.77
HFM1A2PYH4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HFM1A2PYH4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HFM1A2PYH4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
HFM1A2PYH4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
HFM1A2PYH4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
HFM1A2PYH4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC26.1■■□□□ 1.77
HFM1A2PYH4 SIGLEC30P-201ENST00000455569 941 ntBASIC26.1■■□□□ 1.77
HFM1A2PYH4 AC006557.2-201ENST00000592985 1240 ntBASIC26.1■■□□□ 1.77
HFM1A2PYH4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms