Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 CXCL1P1-201ENST00000502804 216 ntBASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC009093.7-201ENST00000623853 1223 ntBASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC006116.8-202ENST00000587620 1550 ntBASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC135776.1-201ENST00000319817 2481 ntBASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
BIVM-ERCC5R4GMW8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC023141.5-201ENST00000458585 616 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC107918.2-201ENST00000530817 355 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC023141.13-201ENST00000604991 943 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC025580.3-201ENST00000617932 1424 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC004461.1-201ENST00000412461 403 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 SLC25A6P2-201ENST00000497974 877 ntBASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
BIVM-ERCC5R4GMW8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
BIVM-ERCC5R4GMW8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 CALY-203ENST00000368558 825 ntTSL 5 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC007064.4-201ENST00000637740 555 ntBASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
BIVM-ERCC5R4GMW8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 REXO1L11P-201ENST00000620964 1927 ntBASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 AC106028.4-201ENST00000614509 607 ntBASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BIVM-ERCC5R4GMW8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BIVM-ERCC5R4GMW8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms