Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 AC113404.2-201ENST00000507884 177 ntBASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 REXO1L6P-202ENST00000619970 1078 ntBASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 AKR1C7P-201ENST00000305623 895 ntBASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA6Q9Y5G7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
PCDHGA6Q9Y5G7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
PCDHGA6Q9Y5G7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA6Q9Y5G7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 MIR149-201ENST00000384879 89 ntBASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 MINOS1P3-201ENST00000457048 203 ntBASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 AC012313.1-201ENST00000593393 3059 ntBASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGA6Q9Y5G7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms