Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP15Q9Y4E8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP15Q9Y4E8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP15Q9Y4E8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP15Q9Y4E8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.17■□□□□ 0.66
USP15Q9Y4E8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 MED15P5-201ENST00000423150 992 ntBASIC19.16■□□□□ 0.66
USP15Q9Y4E8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 IGHV3-22-201ENST00000520721 359 ntBASIC19.16■□□□□ 0.66
USP15Q9Y4E8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP15Q9Y4E8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 AP001269.4-201ENST00000609611 512 ntBASIC19.15■□□□□ 0.66
USP15Q9Y4E8 FAM197Y3-203ENST00000618346 717 ntBASIC19.15■□□□□ 0.66
USP15Q9Y4E8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.15■□□□□ 0.66
USP15Q9Y4E8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP15Q9Y4E8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.14■□□□□ 0.66
USP15Q9Y4E8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP15Q9Y4E8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 AC027796.2-201ENST00000575326 344 ntBASIC19.14■□□□□ 0.65
USP15Q9Y4E8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 AP001160.2-201ENST00000596071 487 ntBASIC19.14■□□□□ 0.65
USP15Q9Y4E8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP15Q9Y4E8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms