Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 MMP23A-201ENST00000234610 1017 ntBASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHMP2BQ9UQN3 HLA-J-201ENST00000462773 1622 ntBASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP2BQ9UQN3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 ECEL1P3-201ENST00000427961 737 ntBASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP2BQ9UQN3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms