Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 FLJ13224-201ENST00000313737 1514 ntBASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
C12orf4Q9NQ89 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 AF186192.3-201ENST00000583427 947 ntBASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 AC073195.1-201ENST00000607241 877 ntBASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 AC130371.2-201ENST00000619443 611 ntBASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C12orf4Q9NQ89 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 UBALD1-205ENST00000590891 2641 ntBASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 AC134043.2-201ENST00000624206 2238 ntBASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C12orf4Q9NQ89 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 AC008040.2-201ENST00000461049 708 ntBASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 B3GAT3P1-201ENST00000471720 806 ntBASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 C1QBPP2-201ENST00000528754 825 ntBASIC15.51■□□□□ 0.07
C12orf4Q9NQ89 RARRES2P10-201ENST00000564312 460 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms