Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 MTCL1P1-201ENST00000446207 792 ntBASIC15.57■□□□□ 0.08
CDH20Q9HBT6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 AC112698.1-201ENST00000510299 916 ntBASIC15.56■□□□□ 0.08
CDH20Q9HBT6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 AC116407.2-201ENST00000613639 860 ntBASIC15.56■□□□□ 0.08
CDH20Q9HBT6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH20Q9HBT6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 AC068472.1-201ENST00000474589 881 ntBASIC15.55■□□□□ 0.08
CDH20Q9HBT6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 AP002414.4-201ENST00000589764 1148 ntBASIC15.55■□□□□ 0.08
CDH20Q9HBT6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH20Q9HBT6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms