Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCP1Q9H5V8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCP1Q9H5V8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCP1Q9H5V8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCP1Q9H5V8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 RCN1P2-201ENST00000398357 915 ntBASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 AC009533.2-201ENST00000543664 586 ntBASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 TP73-AS1-210ENST00000637775 1455 ntBASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCP1Q9H5V8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AL031008.1-201ENST00000619963 541 ntBASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCP1Q9H5V8 AC067852.2-201ENST00000590513 2313 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms