Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
MUC4Q99102 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.01□□□□□ -0.33
MUC4Q99102 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 AC009949.1-201ENST00000623048 1830 ntBASIC13.01□□□□□ -0.33
MUC4Q99102 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.01□□□□□ -0.33
MUC4Q99102 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.01□□□□□ -0.33
MUC4Q99102 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MUC4Q99102 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
MUC4Q99102 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 AL031133.1-201ENST00000406807 723 ntBASIC13□□□□□ -0.33
MUC4Q99102 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 AL359075.1-203ENST00000462729 1002 ntBASIC13□□□□□ -0.33
MUC4Q99102 AC113404.2-201ENST00000507884 177 ntBASIC13□□□□□ -0.33
MUC4Q99102 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13□□□□□ -0.33
MUC4Q99102 AC141257.4-201ENST00000634557 245 ntBASIC13□□□□□ -0.33
MUC4Q99102 AC136944.6-201ENST00000634818 245 ntBASIC13□□□□□ -0.33
MUC4Q99102 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 AC084018.2-201ENST00000613093 2607 ntBASIC13□□□□□ -0.33
MUC4Q99102 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13□□□□□ -0.33
MUC4Q99102 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13□□□□□ -0.33
MUC4Q99102 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 AC133963.1-201ENST00000504166 1679 ntBASIC13□□□□□ -0.33
MUC4Q99102 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13□□□□□ -0.33
MUC4Q99102 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13□□□□□ -0.33
MUC4Q99102 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 BX664615.1-201ENST00000443558 458 ntBASIC13□□□□□ -0.33
MUC4Q99102 AC063952.2-201ENST00000498792 1227 ntBASIC13□□□□□ -0.33
MUC4Q99102 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13□□□□□ -0.33
MUC4Q99102 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MUC4Q99102 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13□□□□□ -0.33
MUC4Q99102 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MUC4Q99102 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.99□□□□□ -0.33
MUC4Q99102 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.99□□□□□ -0.33
MUC4Q99102 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MUC4Q99102 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MUC4Q99102 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MUC4Q99102 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.99□□□□□ -0.33
MUC4Q99102 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MUC4Q99102 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms