Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 FOSL1P1-201ENST00000511041 816 ntBASIC21.13■□□□□ 0.97
DDX11Q96FC9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX11Q96FC9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
DDX11Q96FC9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 GNAS-203ENST00000306120 1878 ntBASIC21.12■□□□□ 0.97
DDX11Q96FC9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.12■□□□□ 0.97
DDX11Q96FC9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX11Q96FC9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 FDX1P1-201ENST00000449115 551 ntBASIC21.11■□□□□ 0.97
DDX11Q96FC9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 LINC00896-202ENST00000609602 2128 ntBASIC21.11■□□□□ 0.97
DDX11Q96FC9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX11Q96FC9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX11Q96FC9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms