Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.32■□□□□ 0.2
HPS1Q92902 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
HPS1Q92902 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 AL160286.2-201ENST00000567150 934 ntBASIC16.32■□□□□ 0.2
HPS1Q92902 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 AL121761.2-201ENST00000598007 1648 ntBASIC16.32■□□□□ 0.2
HPS1Q92902 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 ZNF815P-204ENST00000434898 1737 ntBASIC16.31■□□□□ 0.2
HPS1Q92902 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 KRT8P9-201ENST00000558927 1449 ntBASIC16.31■□□□□ 0.2
HPS1Q92902 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
HPS1Q92902 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS1Q92902 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS1Q92902 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 C2orf69P3-201ENST00000565542 1120 ntBASIC16.31■□□□□ 0.2
HPS1Q92902 AP005242.2-201ENST00000580065 1175 ntBASIC16.31■□□□□ 0.2
HPS1Q92902 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS1Q92902 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS1Q92902 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS1Q92902 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS1Q92902 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HPS1Q92902 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.3■□□□□ 0.2
HPS1Q92902 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HPS1Q92902 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS1Q92902 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HPS1Q92902 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS1Q92902 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
HPS1Q92902 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.3■□□□□ 0.2
HPS1Q92902 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
HPS1Q92902 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS1Q92902 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 AL049597.2-201ENST00000565575 961 ntBASIC16.3■□□□□ 0.2
HPS1Q92902 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.3■□□□□ 0.2
HPS1Q92902 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.3■□□□□ 0.2
HPS1Q92902 AC010947.1-201ENST00000623454 693 ntBASIC16.3■□□□□ 0.2
HPS1Q92902 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS1Q92902 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms