Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 AC004706.3-202ENST00000621574 984 ntBASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 AC135776.1-201ENST00000319817 2481 ntBASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3TC1Q8TE82 YBX2P1-201ENST00000394192 760 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 UPF3AP3-201ENST00000420996 769 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AC003669.1-201ENST00000334569 611 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 KLF4P1-201ENST00000412782 1185 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AC108751.1-201ENST00000490852 363 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 AC010327.4-202ENST00000591484 748 ntBASIC22.06■■□□□ 1.12
SH3TC1Q8TE82 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 RPSAP43-201ENST00000402237 625 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 ELK2BP-201ENST00000415014 1224 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 GPX1P2-201ENST00000429271 606 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 AC092183.1-201ENST00000469884 875 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 AC116407.2-201ENST00000613639 860 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 AC055717.3-201ENST00000622967 595 ntBASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.05■■□□□ 1.12
SH3TC1Q8TE82 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 BICD1-207ENST00000551848 1962 ntBASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms