Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 AC099791.2-201ENST00000605725 427 ntBASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 AC010997.5-201ENST00000609182 354 ntBASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 TNRC18P2-201ENST00000417666 2714 ntBASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC9.77□□□□□ -0.85
SPTSSBQ8NFR3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 AC010525.1-201ENST00000585559 441 ntBASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 AC010980.1-201ENST00000587192 1142 ntBASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms