Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC50Q8IVM0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AP000523.1-201ENST00000398242 1049 ntBASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AC093827.2-201ENST00000512654 315 ntBASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AC008687.5-201ENST00000593746 558 ntBASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AL157888.1-201ENST00000631930 593 ntBASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 AC046158.3-201ENST00000624947 2558 ntBASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC50Q8IVM0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 ECEL1P3-201ENST00000427961 737 ntBASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC50Q8IVM0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 DUTP2-201ENST00000519164 463 ntBASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC50Q8IVM0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 KRT18P22-201ENST00000402024 1347 ntBASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AC022898.2-201ENST00000616822 1312 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms