Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AC092329.2-201ENST00000598402 547 ntBASIC11.8□□□□□ -0.52
SCXQ7RTU7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AC079602.3-201ENST00000623931 403 ntBASIC11.8□□□□□ -0.52
SCXQ7RTU7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AL354751.1-201ENST00000412768 1863 ntBASIC11.8□□□□□ -0.52
SCXQ7RTU7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 TPM4P1-201ENST00000436100 807 ntBASIC11.79□□□□□ -0.52
SCXQ7RTU7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MIR3652-201ENST00000579335 131 ntBASIC11.79□□□□□ -0.52
SCXQ7RTU7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCXQ7RTU7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.79□□□□□ -0.52
SCXQ7RTU7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 KRT8P7-201ENST00000533003 1432 ntBASIC11.78□□□□□ -0.52
SCXQ7RTU7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 AL365209.1-201ENST00000624418 6473 ntBASIC11.78□□□□□ -0.52
SCXQ7RTU7 PRORSD1P-202ENST00000563365 2154 ntBASIC11.78□□□□□ -0.52
SCXQ7RTU7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SCXQ7RTU7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCXQ7RTU7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms