Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4XP62701 AC090340.1-201ENST00000620778 4980 ntBASIC16.07■□□□□ 0.16
RPS4XP62701 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RPS4XP62701 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.07■□□□□ 0.16
RPS4XP62701 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.07■□□□□ 0.16
RPS4XP62701 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 AL645929.1-201ENST00000420084 975 ntBASIC16.07■□□□□ 0.16
RPS4XP62701 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4XP62701 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.07■□□□□ 0.16
RPS4XP62701 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.07■□□□□ 0.16
RPS4XP62701 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.07■□□□□ 0.16
RPS4XP62701 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.07■□□□□ 0.16
RPS4XP62701 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4XP62701 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RPS4XP62701 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4XP62701 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
RPS4XP62701 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4XP62701 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RPS4XP62701 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RPS4XP62701 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.06■□□□□ 0.16
RPS4XP62701 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 HBZP1-201ENST00000354915 429 ntBASIC16.06■□□□□ 0.16
RPS4XP62701 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.06■□□□□ 0.16
RPS4XP62701 ATP5G2P1-201ENST00000433580 426 ntBASIC16.06■□□□□ 0.16
RPS4XP62701 TPM4P1-201ENST00000436100 807 ntBASIC16.06■□□□□ 0.16
RPS4XP62701 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.06■□□□□ 0.16
RPS4XP62701 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.06■□□□□ 0.16
RPS4XP62701 LINC01451-201ENST00000623792 534 ntBASIC16.06■□□□□ 0.16
RPS4XP62701 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.06■□□□□ 0.16
RPS4XP62701 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RPS4XP62701 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4XP62701 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4XP62701 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 AL023806.1-201ENST00000603994 1649 ntBASIC16.05■□□□□ 0.16
RPS4XP62701 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RPS4XP62701 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 IGHGP-201ENST00000390555 1178 ntBASIC16.05■□□□□ 0.16
RPS4XP62701 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.05■□□□□ 0.16
RPS4XP62701 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.05■□□□□ 0.16
RPS4XP62701 AC092597.1-201ENST00000487352 616 ntBASIC16.05■□□□□ 0.16
RPS4XP62701 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.05■□□□□ 0.16
RPS4XP62701 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.05■□□□□ 0.16
RPS4XP62701 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RPS4XP62701 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.05■□□□□ 0.16
RPS4XP62701 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RPS4XP62701 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.05■□□□□ 0.16
RPS4XP62701 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.05■□□□□ 0.16
RPS4XP62701 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms