Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 SBF1P1-201ENST00000444527 5631 ntBASIC13.64□□□□□ -0.23
SNRPEP62304 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 AL356652.1-201ENST00000615962 565 ntBASIC13.64□□□□□ -0.23
SNRPEP62304 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.64□□□□□ -0.23
SNRPEP62304 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.64□□□□□ -0.23
SNRPEP62304 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNRPEP62304 AC112777.1-201ENST00000540175 1423 ntBASIC13.64□□□□□ -0.23
SNRPEP62304 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.64□□□□□ -0.23
SNRPEP62304 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 SYT6-210ENST00000641643 1587 ntBASIC13.63□□□□□ -0.23
SNRPEP62304 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 AL161772.1-201ENST00000610494 4412 ntBASIC13.63□□□□□ -0.23
SNRPEP62304 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.63□□□□□ -0.23
SNRPEP62304 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SNRPEP62304 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SNRPEP62304 AC129492.7-201ENST00000622992 756 ntBASIC13.63□□□□□ -0.23
SNRPEP62304 AC074183.2-201ENST00000623112 922 ntBASIC13.63□□□□□ -0.23
SNRPEP62304 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNRPEP62304 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNRPEP62304 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
SNRPEP62304 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SNRPEP62304 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.62□□□□□ -0.23
SNRPEP62304 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.62□□□□□ -0.23
SNRPEP62304 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNRPEP62304 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 GRK6P1-201ENST00000400595 1711 ntBASIC13.62□□□□□ -0.23
SNRPEP62304 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 AC100803.2-201ENST00000562459 1963 ntBASIC13.62□□□□□ -0.23
SNRPEP62304 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.62□□□□□ -0.23
SNRPEP62304 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SNRPEP62304 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.62□□□□□ -0.23
SNRPEP62304 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.62□□□□□ -0.23
SNRPEP62304 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNRPEP62304 MIR3181-201ENST00000578512 73 ntBASIC13.62□□□□□ -0.23
SNRPEP62304 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.62□□□□□ -0.23
SNRPEP62304 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNRPEP62304 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SNRPEP62304 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms