Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.62■□□□□ 0.57
ERVFC1P60507 AL805961.1-202ENST00000641562 540 ntBASIC18.62■□□□□ 0.57
ERVFC1P60507 BCAR1-209ENST00000546196 1340 ntBASIC18.62■□□□□ 0.57
ERVFC1P60507 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERVFC1P60507 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.62■□□□□ 0.57
ERVFC1P60507 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERVFC1P60507 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.61■□□□□ 0.57
ERVFC1P60507 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERVFC1P60507 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.61■□□□□ 0.57
ERVFC1P60507 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.61■□□□□ 0.57
ERVFC1P60507 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERVFC1P60507 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.61■□□□□ 0.57
ERVFC1P60507 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.61■□□□□ 0.57
ERVFC1P60507 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
ERVFC1P60507 KRT19P2-202ENST00000557173 1012 ntBASIC18.61■□□□□ 0.57
ERVFC1P60507 AC096734.2-201ENST00000562054 433 ntBASIC18.61■□□□□ 0.57
ERVFC1P60507 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.61■□□□□ 0.57
ERVFC1P60507 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.61■□□□□ 0.57
ERVFC1P60507 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.61■□□□□ 0.57
ERVFC1P60507 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.61■□□□□ 0.57
ERVFC1P60507 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERVFC1P60507 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
ERVFC1P60507 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.6■□□□□ 0.57
ERVFC1P60507 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.6■□□□□ 0.57
ERVFC1P60507 STK19B-204ENST00000512515 211 ntBASIC18.6■□□□□ 0.57
ERVFC1P60507 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.6■□□□□ 0.57
ERVFC1P60507 STK25P1-201ENST00000585406 838 ntBASIC18.6■□□□□ 0.57
ERVFC1P60507 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.6■□□□□ 0.57
ERVFC1P60507 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.6■□□□□ 0.57
ERVFC1P60507 AL096828.2-201ENST00000567259 1965 ntBASIC18.6■□□□□ 0.57
ERVFC1P60507 AC097637.2-201ENST00000624096 1997 ntBASIC18.6■□□□□ 0.57
ERVFC1P60507 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERVFC1P60507 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 AC073592.3-201ENST00000625118 1834 ntBASIC18.6■□□□□ 0.57
ERVFC1P60507 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERVFC1P60507 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERVFC1P60507 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ERVFC1P60507 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.6■□□□□ 0.57
ERVFC1P60507 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 RHOQP3-201ENST00000437982 621 ntBASIC18.59■□□□□ 0.57
ERVFC1P60507 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.59■□□□□ 0.57
ERVFC1P60507 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERVFC1P60507 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.59■□□□□ 0.57
ERVFC1P60507 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.59■□□□□ 0.57
ERVFC1P60507 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.59■□□□□ 0.57
ERVFC1P60507 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms