Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH12P55289 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CDH12P55289 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDH12P55289 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH12P55289 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 HMGA1P5-201ENST00000412453 271 ntBASIC16.6■□□□□ 0.25
CDH12P55289 AL596275.1-201ENST00000423464 877 ntBASIC16.6■□□□□ 0.25
CDH12P55289 AL512604.3-201ENST00000569583 964 ntBASIC16.6■□□□□ 0.25
CDH12P55289 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH12P55289 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH12P55289 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH12P55289 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
CDH12P55289 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CDH12P55289 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.59■□□□□ 0.25
CDH12P55289 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH12P55289 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH12P55289 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH12P55289 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH12P55289 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CDH12P55289 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDH12P55289 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH12P55289 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDH12P55289 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 NKILA-202ENST00000614771 2598 ntBASIC16.58■□□□□ 0.25
CDH12P55289 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDH12P55289 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH12P55289 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH12P55289 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH12P55289 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH12P55289 AC093827.2-201ENST00000512654 315 ntBASIC16.58■□□□□ 0.24
CDH12P55289 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH12P55289 NEK4P2-201ENST00000580004 1012 ntBASIC16.58■□□□□ 0.24
CDH12P55289 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CDH12P55289 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH12P55289 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms