Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GPC3P51654 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 AC022898.2-201ENST00000616822 1312 ntBASIC19.62■□□□□ 0.73
GPC3P51654 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.62■□□□□ 0.73
GPC3P51654 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.62■□□□□ 0.73
GPC3P51654 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.62■□□□□ 0.73
GPC3P51654 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.62■□□□□ 0.73
GPC3P51654 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GPC3P51654 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
GPC3P51654 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC3P51654 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
GPC3P51654 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GPC3P51654 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC3P51654 AC010460.3-201ENST00000511359 1579 ntBASIC19.61■□□□□ 0.73
GPC3P51654 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 FLJ13224-201ENST00000313737 1514 ntBASIC19.61■□□□□ 0.73
GPC3P51654 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC3P51654 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
GPC3P51654 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 AL022342.1-201ENST00000400363 863 ntBASIC19.61■□□□□ 0.73
GPC3P51654 AL031284.1-201ENST00000419297 478 ntBASIC19.61■□□□□ 0.73
GPC3P51654 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.61■□□□□ 0.73
GPC3P51654 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GPC3P51654 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
GPC3P51654 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC3P51654 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC3P51654 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC3P51654 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GPC3P51654 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC3P51654 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC3P51654 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC3P51654 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC3P51654 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GPC3P51654 RNPS1P1-201ENST00000507437 918 ntBASIC19.6■□□□□ 0.73
GPC3P51654 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.6■□□□□ 0.73
GPC3P51654 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.6■□□□□ 0.73
GPC3P51654 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms