Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC31.13■■■□□ 2.57
NCAPD3P42695 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC31.13■■■□□ 2.57
NCAPD3P42695 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NCAPD3P42695 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NCAPD3P42695 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NCAPD3P42695 AL135744.1-201ENST00000565098 629 ntBASIC31.13■■■□□ 2.57
NCAPD3P42695 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
NCAPD3P42695 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NCAPD3P42695 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
NCAPD3P42695 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC31.12■■■□□ 2.57
NCAPD3P42695 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NCAPD3P42695 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NCAPD3P42695 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31.12■■■□□ 2.57
NCAPD3P42695 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC31.12■■■□□ 2.57
NCAPD3P42695 HNRNPA1P40-201ENST00000426371 1278 ntBASIC31.12■■■□□ 2.57
NCAPD3P42695 SLC25A6P2-201ENST00000497974 877 ntBASIC31.12■■■□□ 2.57
NCAPD3P42695 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
NCAPD3P42695 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC31.12■■■□□ 2.57
NCAPD3P42695 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC31.12■■■□□ 2.57
NCAPD3P42695 SERF2-217ENST00000630046 862 ntTSL 5 BASIC31.12■■■□□ 2.57
NCAPD3P42695 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
NCAPD3P42695 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
NCAPD3P42695 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC31.11■■■□□ 2.57
NCAPD3P42695 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
NCAPD3P42695 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC31.11■■■□□ 2.57
NCAPD3P42695 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC31.11■■■□□ 2.57
NCAPD3P42695 AL358472.5-202ENST00000641448 1267 ntBASIC31.11■■■□□ 2.57
NCAPD3P42695 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC31.11■■■□□ 2.57
NCAPD3P42695 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
NCAPD3P42695 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC31.11■■■□□ 2.57
NCAPD3P42695 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NCAPD3P42695 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
NCAPD3P42695 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
NCAPD3P42695 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
NCAPD3P42695 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC31.1■■■□□ 2.57
NCAPD3P42695 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
NCAPD3P42695 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC31.1■■■□□ 2.57
NCAPD3P42695 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NCAPD3P42695 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
NCAPD3P42695 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
NCAPD3P42695 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NCAPD3P42695 MRPS18AP1-201ENST00000414458 589 ntBASIC31.09■■■□□ 2.57
NCAPD3P42695 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC31.09■■■□□ 2.57
NCAPD3P42695 NME2P1-201ENST00000426182 414 ntBASIC31.09■■■□□ 2.57
NCAPD3P42695 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC31.09■■■□□ 2.57
NCAPD3P42695 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NCAPD3P42695 AL596325.1-201ENST00000563991 1082 ntBASIC31.09■■■□□ 2.57
NCAPD3P42695 AKAP8P1-201ENST00000434743 1349 ntBASIC31.09■■■□□ 2.57
NCAPD3P42695 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
NCAPD3P42695 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NCAPD3P42695 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC31.09■■■□□ 2.57
NCAPD3P42695 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC31.08■■■□□ 2.57
NCAPD3P42695 AC092580.3-201ENST00000430932 139 ntBASIC31.08■■■□□ 2.57
NCAPD3P42695 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC31.08■■■□□ 2.57
NCAPD3P42695 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC31.08■■■□□ 2.57
NCAPD3P42695 SRP9-204ENST00000619790 377 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 PHGDH-209ENST00000641074 1780 ntBASIC31.08■■■□□ 2.57
NCAPD3P42695 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 ME2-218ENST00000640965 2476 ntTSL 5 BASIC31.08■■■□□ 2.57
NCAPD3P42695 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
NCAPD3P42695 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NCAPD3P42695 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC31.08■■■□□ 2.57
NCAPD3P42695 SPCS2P4-201ENST00000436160 681 ntBASIC31.08■■■□□ 2.57
NCAPD3P42695 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC31.08■■■□□ 2.57
NCAPD3P42695 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC31.08■■■□□ 2.57
NCAPD3P42695 RARRES2P8-201ENST00000566335 367 ntBASIC31.08■■■□□ 2.57
NCAPD3P42695 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC31.08■■■□□ 2.57
NCAPD3P42695 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NCAPD3P42695 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC31.07■■■□□ 2.56
NCAPD3P42695 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC31.07■■■□□ 2.56
NCAPD3P42695 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NCAPD3P42695 AC008677.1-201ENST00000519230 1561 ntBASIC31.07■■■□□ 2.56
NCAPD3P42695 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NCAPD3P42695 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
NCAPD3P42695 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
NCAPD3P42695 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC31.07■■■□□ 2.56
NCAPD3P42695 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC31.07■■■□□ 2.56
NCAPD3P42695 LINC01225-203ENST00000563550 1244 ntBASIC31.07■■■□□ 2.56
NCAPD3P42695 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC31.07■■■□□ 2.56
NCAPD3P42695 AC100803.2-201ENST00000562459 1963 ntBASIC31.07■■■□□ 2.56
NCAPD3P42695 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NCAPD3P42695 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NCAPD3P42695 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NCAPD3P42695 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms